After lots of play testing, we are now going the route of three decks instead of one. What happens is that now, instead of having to draw into construction projects and resources, you will always get a new resource into play from your Resource Deck each turn, you will always refill your queue from your construction deck. Your hand will be drawn from your stack of Commands, Personnel and Research Projects. This will let the game focus more on the interaction of the ships and affecting the gameplay with your command cards.
Thoughts?
You can see the original rules posted below or on https://www.dropbox.com/sh/rrbiv0e1t2tgv12/2W45KSmYmu